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1.
Anticancer Drugs ; 33(1): e21-e27, 2022 01 01.
Artigo em Inglês | MEDLINE | ID: mdl-34561998

RESUMO

The nucleolus is the site of ribosome biogenesis and is found to play an important role in stress sensing. For over 100 years, the increase in the size and number of nucleoli has been considered as a marker of aggressive tumors. Despite this, the contribution of the nucleolus and the biologic processes mediated by it to cancer pathogenesis has been largely overlooked. This state has been changed over the recent decades with the demonstration that the nucleolus controls numerous cellular functions associated with cancer development. Induction of nucleolar stress has recently been regarded as being superior to conventional cytotoxic/cytostatic strategy in that it is more selective to neoplastic cells while sparing normal cells. Natural products represent an excellent source of bioactive molecules and some of them have been found to be able to induce nucleolar stress. The demonstration of these nucleolar stress-inducing natural products has paved the way for a new therapeutic approach to more delicate tumor cell-killing. This review provides a contemporary summary of the role of the nucleolus as a novel promising target for cancer therapy, with particular emphasis on natural products as an exciting new class of anti-cancer drugs with nucleolar stress-inducing properties.


Assuntos
Antineoplásicos/farmacologia , Produtos Biológicos/farmacologia , Nucléolo Celular/efeitos dos fármacos , Neoplasias/patologia , DNA Ribossômico/efeitos dos fármacos , Humanos , Neoplasias/tratamento farmacológico , RNA Polimerase I/efeitos dos fármacos , RNA Ribossômico/efeitos dos fármacos , Estresse Fisiológico/efeitos dos fármacos
2.
Folia Biol (Praha) ; 61(2): 49-59, 2015.
Artigo em Inglês | MEDLINE | ID: mdl-26333121

RESUMO

We studied the effect of ellagic acid (EA) on the morphology of nucleoli and on the pattern of major proteins of the nucleolus. After EA treatment of HeLa cells, we observed condensation of nucleoli as documented by the pattern of argyrophilic nucleolar organizer regions (AgNORs). EA also induced condensation of RPA194-positive nucleolar regions, but no morphological changes were observed in nucleolar compartments positive for UBF1/2 proteins or fibrillarin. Studied morphological changes induced by EA were compared with the morphology of control, non-treated cells and with pronounced condensation of all nucleolar domains caused by actinomycin D (ACT-D) treatment. Similarly as ACT-D, but in a lesser extent, EA induced an increased number of 53BP1-positive DNA lesions. However, the main marker of DNA lesions, γH2AX, was not accumulated in body-like nuclear structures. An increased level of γH2AX was found by immunofluorescence and Western blots only after EA treatment. Intriguingly, the levels of fibrillarin, UBF1/2 and γH2AX were increased at the promoters of ribosomal genes, while 53BP1 and CARM1 levels were decreased by EA treatment at these genomic regions. In the entire genome, EA reduced H3R17 dimethylation. Taken together, ellagic acid is capable of significantly changing the nucleolar morphology and protein levels inside the nucleolus.


Assuntos
Proteínas Adaptadoras de Sinalização CARD/antagonistas & inibidores , Nucléolo Celular/efeitos dos fármacos , DNA Ribossômico/efeitos dos fármacos , Ácido Elágico/farmacologia , Epigênese Genética/efeitos dos fármacos , Guanilato Ciclase/antagonistas & inibidores , Processamento de Proteína Pós-Traducional/efeitos dos fármacos , Proteínas Adaptadoras de Sinalização CARD/análise , Divisão Celular/efeitos dos fármacos , Nucléolo Celular/química , Nucléolo Celular/ultraestrutura , Proteínas Cromossômicas não Histona/análise , Dano ao DNA , DNA Ribossômico/genética , Dactinomicina/farmacologia , Fase G2/efeitos dos fármacos , Guanilato Ciclase/análise , Células HeLa/química , Células HeLa/efeitos dos fármacos , Histonas/análise , Histonas/metabolismo , Humanos , Peptídeos e Proteínas de Sinalização Intracelular/análise , Metilação , Proteínas de Neoplasias/análise , Região Organizadora do Nucléolo/química , Região Organizadora do Nucléolo/efeitos dos fármacos , Região Organizadora do Nucléolo/ultraestrutura , Proteínas Pol1 do Complexo de Iniciação de Transcrição/análise , Regiões Promotoras Genéticas , RNA Polimerase I/análise , Proteína 1 de Ligação à Proteína Supressora de Tumor p53
3.
Rev. méd. Chile ; 137(10): 1309-1314, oct. 2009. ilus, tab
Artigo em Espanhol | LILACS | ID: lil-534037

RESUMO

Background: Helicobacter pylori antimicrobial resistance rates differ among countries and even between different areas of a country. In Colombia, the most commonly used antimicrobials for the treatment of H pylori infection are amoxicillin, clarithromycin and metronidazole. Aim: To determine antimicrobial susceptibility of H pylori strains isolated in Colombia. Materials and methods: Eighty eight strains of H pylori were isolated and identified by microbiological methods and confirmed with polymerase chain reaction (PCR). The detection of antimicrobial resistance to amoxicillin, clarithromycin, metronidazole and tetraclycline, was conducted by the Etest method. Mutations in the 23S rDNA, involved in resistance to clarithromycin, were detected using PCR and restriction fragment lenght polymorphism. Results: Eighty eight and 2.2 percent of the strains were resistant to metronidazole and clarithromycin, respectively. No isolate was simultaneously resistant to amoxicillin or tetracycline. The two clarithromycin resistant strains were homozygous for the A2143G mutation. No mutations were found in the remaining 86 susceptible strains. Conclusions: The high rate of metronidazole resistance in our population precludes the use of this drug for the empirical treatment of Hpylori infection.


Assuntos
Humanos , Antibacterianos/farmacologia , Farmacorresistência Bacteriana/genética , Infecções por Helicobacter/microbiologia , Helicobacter pylori/efeitos dos fármacos , Metronidazol/farmacologia , Antibacterianos/classificação , Colômbia/epidemiologia , DNA Ribossômico/efeitos dos fármacos , DNA Ribossômico/genética , Farmacorresistência Bacteriana/efeitos dos fármacos , Infecções por Helicobacter/tratamento farmacológico , Infecções por Helicobacter/epidemiologia , Helicobacter pylori/genética , Testes de Sensibilidade Microbiana/métodos , Mutação/efeitos dos fármacos , Mutação/genética
4.
Anticancer Drugs ; 18(7): 763-72, 2007 Aug.
Artigo em Inglês | MEDLINE | ID: mdl-17581298

RESUMO

We have examined the ability of actinomycin D to induce apoptosis in human peripheral blood lymphocytes. Run-On assays were performed to specify the primary molecular damage, reverse transcription-PCR, Western blots and flow cytometry studies were performed to ascertain which proteins of the apoptosis machinery were affected to cause actinomycin D-induced cell death. Expression of 23 apoptosis-related genes was investigated. The down-regulation of ribosomal RNA synthesis caused by actinomycin D induced a mitochondria-dependent apoptosis. Although the expression of the majority of examined genes remained indifferent against actinomycin D activity, the cellular level of p53 protein increased, subsequently upregulating both Puma mRNA and protein. Puma-mediated mitochondrial apoptosis was accompanied by nucleolin cleavage and Bcl-2 mRNA destabilization. The stability of the cellular level of Bcl-2 protein independent of a mRNA decrease suggests that protection of Bcl-2 protein against proteasomal degradation can moderate the apoptotic process. In peripheral blood lymphocytes cultured in vitro, the apoptosis induced by a low concentration of actinomycin D (10 nmol/l) is dependent on p53 and Puma activation. This apoptotic pathway is demonstrated in peripheral blood lymphocytes for the first time. A different apoptotic pathway induced in peripheral blood lymphocytes using this drug has, however, been previously revealed by other authors. The combination of cell specificity and dose-dependent effects can likely play a decisive role in apoptosis observed in peripheral blood lymphocytes after genotoxic drug application.


Assuntos
Antibióticos Antineoplásicos/farmacologia , Apoptose/efeitos dos fármacos , Dactinomicina/farmacologia , Antibióticos Antineoplásicos/administração & dosagem , Proteínas Reguladoras de Apoptose/metabolismo , Western Blotting , Sobrevivência Celular , Dano ao DNA/efeitos dos fármacos , DNA Ribossômico/efeitos dos fármacos , Dactinomicina/administração & dosagem , Relação Dose-Resposta a Droga , Regulação para Baixo , Citometria de Fluxo , Humanos , Linfócitos/efeitos dos fármacos , Mitocôndrias/metabolismo , Proteínas Proto-Oncogênicas/metabolismo , Proteínas Proto-Oncogênicas c-bcl-2/metabolismo , RNA Mensageiro/metabolismo , Reação em Cadeia da Polimerase Via Transcriptase Reversa , Proteína Supressora de Tumor p53/metabolismo , Regulação para Cima/efeitos dos fármacos
5.
EMBO J ; 26(2): 448-58, 2007 Jan 24.
Artigo em Inglês | MEDLINE | ID: mdl-17203076

RESUMO

Nutrient starvation or rapamycin treatment, through inhibition of target of rapamycin, causes condensation of ribosomal DNA (rDNA) array and nucleolar contraction in budding yeast. Here we report that under such conditions, condensin is rapidly relocated into the nucleolus and loaded to rDNA tandem repeats, which is required for rDNA condensation. Rpd3-dependent histone deacetylation is necessary and sufficient for condensin's relocalization and loading to rDNA array, suggesting that histone modification plays a regulatory role for condensin targeting. Rapamycin independently, yet coordinately, inhibits rDNA transcription and promotes condensin loading to rDNA array. Unexpectedly, we found that inhibition of rDNA transcription in the absence of condensin loading leads to rDNA instability. Our data suggest that enrichment of condensin prevents rDNA instability during nutrient starvation. Together, these observations unravel a novel role for condensin in the maintenance of regional genomic stability.


Assuntos
Adenosina Trifosfatases/metabolismo , DNA Ribossômico , Proteínas de Ligação a DNA/metabolismo , Alimentos , Instabilidade Genômica , Complexos Multiproteicos/metabolismo , Adenosina Trifosfatases/fisiologia , Antifúngicos/farmacologia , Nucléolo Celular/efeitos dos fármacos , Nucléolo Celular/metabolismo , Segregação de Cromossomos , Cromossomos Fúngicos/metabolismo , Empacotamento do DNA , DNA Ribossômico/efeitos dos fármacos , DNA Ribossômico/metabolismo , Proteínas de Ligação a DNA/fisiologia , Histona Desacetilases/fisiologia , Complexos Multiproteicos/fisiologia , Organismos Geneticamente Modificados , Saccharomycetales , Sirolimo/farmacologia , Transcrição Gênica/efeitos dos fármacos
6.
Eur J Cancer Prev ; 13(4): 239-48, 2004 Aug.
Artigo em Inglês | MEDLINE | ID: mdl-15554550

RESUMO

The effect of dietary fat on breast cancer is a longstanding and an unresolved issue. We found that 17beta-estradiol (E2) could be activated by the epoxide-forming oxidant dimethyldioxirane (DMDO) to bind DNA-forming DNA adducts both in vitro and in vivo, and to inhibit nuclear RNA synthesis. We proposed that E2 epoxidation is the underlying mechanism for the initiation of breast cancer carcinogenesis (Carcinogenesis 17, 1957-61, 1996). This report is on the transcriptional and DNA-binding properties of vegetable oils and fatty acids, and on the potentials of these compounds to prevent the formation of E2 epoxide. The results show that vegetable oils, having no effect on nuclear RNA synthesis either before or after DMDO treatment, were all able to prevent the formation of E2 epoxide independent of their mono- or polyunsaturated fatty acid content. Similarly, unsaturated fatty acids, regardless of chain length and number of double bonds, were all able to prevent the formation of E2 epoxide as reflected by the loss of the ability of [3H]E2 to bind DNA. In contrast to vegetable oils, the results indicated that the unsaturated fatty acids palmitoleic, oleic, linoleic, linolenic and arachidonic acid could be activated by DMDO to inhibit nuclear RNA synthesis, and that the mono-unsaturated fatty acids (i.e. palmitoleic and oleic acid) were stronger inhibitors than fatty acids with more than one double bond (e.g. linoleic, linolenic and arachidonic acid). [32P]Post-labeling analysis revealed that under identical DMDO activation, the DNA adducts formed for oleic acid were 17098 adducts/10(8) nucleotides, which was 20-fold more than palmitoleic acid (815), and 120-fold more than alpha-linolenic acid (142). This result strongly suggests that oleic acid could be a potential initiating carcinogen after epoxidation.


Assuntos
Anticarcinógenos/farmacologia , Neoplasias da Mama/prevenção & controle , Adutos de DNA/metabolismo , Ácidos Graxos Insaturados/farmacologia , Óleos de Plantas/farmacologia , Animais , Quimioprevenção/métodos , Adutos de DNA/efeitos dos fármacos , DNA Ribossômico/efeitos dos fármacos , DNA Ribossômico/metabolismo , Gorduras na Dieta/farmacologia , Estradiol/farmacologia , Feminino , Humanos , RNA Mensageiro/efeitos dos fármacos , RNA Mensageiro/metabolismo , Ratos , Sensibilidade e Especificidade , Células Tumorais Cultivadas
7.
Exp Cell Res ; 242(2): 487-94, 1998 Aug 01.
Artigo em Inglês | MEDLINE | ID: mdl-9683536

RESUMO

Mutations at the Werner helicase locus (WRN) are responsible for the Werner syndrome (WS), a "caricature of aging." We have localized the Werner protein (WRNp) to the nucleoli of replicating mammalian cells, where its appearance is associated with transcriptional activity. A dramatic reduction of the nucleolar signal and of [3H]uridine incorporation occurred when cultures were made quiescent or were exposed to 4-nitroquinoline-1-oxide (4NQO), to which WS cells are particularly susceptible. Total cellular levels of WRNp, however, did not change, and virtually all WRNp was in the nuclear fractions, consistent with translocation to the nucleoplasm and/or masking of the epitopes. The 4NQO-induced altered state of WRNp was prevented by Na3VO4, but not by okadaic acid, suggesting that WRNp localization/function is partially regulated by kinases/phosphatases for Tyr substrates on WRNp or interacting proteins. The repression of rDNA transcription by 4NQO was not reversed by Na3VO4. We suggest that physiological states and genotoxic agents modulate the interaction of WRNp with rDNA, consistent with a role of WRNp in rDNA transcription.


Assuntos
Nucléolo Celular/enzimologia , DNA Helicases/metabolismo , Síndrome de Werner/enzimologia , 4-Nitroquinolina-1-Óxido/farmacologia , Animais , Células COS/citologia , Células COS/efeitos dos fármacos , Células COS/enzimologia , Carcinógenos/farmacologia , Ciclo Celular/genética , Linhagem Celular Transformada , Nucléolo Celular/efeitos dos fármacos , Nucléolo Celular/genética , Meios de Cultura Livres de Soro/farmacologia , DNA Helicases/análise , DNA Helicases/efeitos dos fármacos , DNA Helicases/genética , DNA Ribossômico/efeitos dos fármacos , DNA Ribossômico/genética , Inibidores Enzimáticos/farmacologia , Exodesoxirribonucleases , Técnica Indireta de Fluorescência para Anticorpo , Humanos , Monoéster Fosfórico Hidrolases/antagonistas & inibidores , RecQ Helicases , Coloração e Rotulagem , Transcrição Gênica/genética , Células Tumorais Cultivadas/citologia , Células Tumorais Cultivadas/efeitos dos fármacos , Células Tumorais Cultivadas/enzimologia , Síndrome de Werner/genética , Helicase da Síndrome de Werner
8.
Biochemistry ; 36(42): 12653-9, 1997 Oct 21.
Artigo em Inglês | MEDLINE | ID: mdl-9376372

RESUMO

We have examined the role of drug structure and histone acetylation in DNA damage produced by the enediyne antibiotic calicheamicin gammaII in nucleosomes reconstituted onto the 5S rRNA gene of Xenopus borealis. Consistent with previous observations, calicheamicin damage at the 3'-end of a purine tract (positions -13 and -14) was enhanced in the nucleosome compared to the naked DNA while damage at other sites was somewhat reduced in the nucleosome. However, damage produced by esperamicin C, an analog of calicheamicin missing the terminal sugar-aromatic ring in the side chain, showed no enhancement at positions -13 and -14, and its sequence selectivity in naked DNA was markedly different from that of calicheamicin. This highlights the importance of the intact tetrasaccharide side chain in the recognition of the structural deformation occurring at the 3'-ends of purine tracts. Both drugs produced identical cleavage patterns in normal and hyperacetylated nucleosomes. Given the sensitivity of calicheamicin to local DNA conformation, this observation is consistent with other studies that suggest that histone acetylation alone does not significantly affect the local conformation of core DNA in the nucleosome.


Assuntos
Aminoglicosídeos , Antibacterianos/química , Antibacterianos/toxicidade , Antibióticos Antineoplásicos/toxicidade , Dano ao DNA , DNA Ribossômico/química , Histonas/metabolismo , Nucleossomos/efeitos dos fármacos , Acetilação , Animais , Antibióticos Antineoplásicos/química , Sequência de Bases , Cromatografia em Gel , DNA Ribossômico/efeitos dos fármacos , Enedi-Inos , Células HeLa , Histonas/isolamento & purificação , Humanos , Radical Hidroxila/metabolismo , Estrutura Molecular , Nucleossomos/fisiologia , RNA Ribossômico 5S/genética , Xenopus
9.
Radiats Biol Radioecol ; 36(6): 865-73, 1996.
Artigo em Russo | MEDLINE | ID: mdl-9026293

RESUMO

Human lymphocytes were X-irradiated at doses 0-10(-2) Gy and allowed to repair for some time. Nuclei were prepared and digested with restriction endonuclease Rsa I to selectively release 28S RNA gene fragment fraction, containing the DNA-binding protein, Hpa II digestion of nuclei was used to investigate the methylation of the 28S RNA gene fragment. There was a differential enrichment of 28S RNA gene binding protein for different X-ray doses with maximum enrichment for dose 2-3 x 10(-2) Gy with following diminish to 10 x 10(-2). The enrichment of less methylated fractions of 28S RNA gene was observed during X-irradiation. This might be explained by a different X-ray-induced changes of methylated and unmethylated rDNA binding with nuclear proteins. The possible mechanism for this phenomena are discussed.


Assuntos
Enzimas de Restrição do DNA/farmacologia , Linfócitos/efeitos da radiação , RNA Ribossômico 28S/efeitos da radiação , Proteínas Sanguíneas/efeitos dos fármacos , Proteínas Sanguíneas/metabolismo , Proteínas Sanguíneas/efeitos da radiação , Núcleo Celular/efeitos dos fármacos , Núcleo Celular/metabolismo , Núcleo Celular/efeitos da radiação , Células Cultivadas , Metilação de DNA/efeitos da radiação , DNA Ribossômico/sangue , DNA Ribossômico/efeitos dos fármacos , DNA Ribossômico/efeitos da radiação , Relação Dose-Resposta à Radiação , Humanos , Linfócitos/efeitos dos fármacos , Linfócitos/metabolismo , Ligação Proteica/efeitos da radiação , RNA Ribossômico 28S/efeitos dos fármacos , RNA Ribossômico 28S/genética , RNA Ribossômico 28S/metabolismo
10.
Exp Cell Res ; 224(1): 163-73, 1996 Apr 10.
Artigo em Inglês | MEDLINE | ID: mdl-8612682

RESUMO

Fluorescence in situ hybridization and immunofluorescence have been used to visualize specific genomic DNA sequences and proteins in interphase nuclei treated with transcriptional inhibitors. The adenosine analog 5,6-dichloro-beta-D-ribofuranosylbenzimidazole (DRB) and alpha-amanitin selectively inhibit transcription by RNA polymerase II at low doses. Upon exposure to DRB or alpha-amanitin the fibrillar components of the normally compact nucleolus unravel into necklace-like structures which represent highly extended linear arrays of ribosomal (r)RNA genes. Similarly, blocks of tandemly repeated satellite DNAs dissociate into extended beaded strands. Localized (euchromatic) chromosome domains and even whole chromosome territories disperse throughout the nuclear interior. Treatment of cells with actinomycin D (AMD) at doses that block rRNA synthesis does not cause significant decondensation of nucleolar, heterochromatic, and interphase chromosome domains. Interestingly, both alpha-amanitin and AMD cause coilin to associate with the nucleolar domain. In AMD-treated cells, coilin is enriched in nucleolar caps abutting upon the residual nucleolus. After alpha-amanitin treatment, coilin is concentrated in numerous beads closely associated with individual rDNA transcription units within nucleolar necklaces. The changes in higher-order nuclear structure are reversible in cell cultures exposed to nontoxic doses of transcriptional inhibitors. It therefore may be concluded that nuclear topographic organization is dependent on a continued transcription of nuclear genes, but not of the rRNA genes.


Assuntos
Nucléolo Celular/efeitos dos fármacos , Cromatina/efeitos dos fármacos , Cromossomos/efeitos dos fármacos , RNA Polimerase II/antagonistas & inibidores , Transcrição Gênica/efeitos dos fármacos , Amanitinas/farmacologia , Nucléolo Celular/ultraestrutura , Células Cultivadas , Cromatina/ultraestrutura , Cromossomos/ultraestrutura , DNA Ribossômico/efeitos dos fármacos , DNA Satélite/efeitos dos fármacos , Dactinomicina/farmacologia , Diclororribofuranosilbenzimidazol/farmacologia , Inibidores Enzimáticos/farmacologia , Fibroblastos , Humanos , Hibridização in Situ Fluorescente , Interfase/fisiologia , Sequências Repetitivas de Ácido Nucleico/efeitos dos fármacos
11.
Proc Natl Acad Sci U S A ; 93(4): 1370-5, 1996 Feb 20.
Artigo em Inglês | MEDLINE | ID: mdl-8643638

RESUMO

A base-pair resolution method for determining nucleosome position in vitro has been developed to com- plement existing, less accurate methods. Cysteaminyl EDTA was tethered to a recombinant histone octamer via a mutant histone H4 with serine 47 replaced by cysteine. When assembled into nucleosome core particles, the DNA could be cut site specifically by hydroxyl radical-catalyzed chain scission by using the Fenton reaction. Strand cleavage occurs mainly at a single nucleotide close to the dyad axis of the core particle, and assignment of this location via the symmetry of the nucleosome allows base-pair resolution mapping of the histone octamer position on the DNA. The positions of the histone octamer and H3H4 tetramer were mapped on a 146-bp Lytechinus variegatus 5S rRNA sequence and a twofold-symmetric derivative. The weakness of translational determinants of nucleosome positioning relative to the overall affinity of the histone proteins for this DNA is clearly demonstrated. The predominant location of both histone octamer and H3H4 tetramer assembled on the 5S rDNA is off center. Shifting the nucleosome core particle position along DNA within a conserved rotational phase could be induced under physiologically relevant conditions. Since nucleosome shifting has important consequences for chromatin structure and gene regulation, an approach to the thermodynamic characterization of this movement is proposed. This mapping method is potentially adaptable for determining nucleosome position in chromatin in vivo.


Assuntos
DNA Ribossômico/genética , DNA/metabolismo , Histonas/metabolismo , Peróxido de Hidrogênio/farmacologia , Radical Hidroxila , Ferro/farmacologia , Nucleossomos/genética , RNA Ribossômico 5S/genética , Ouriços-do-Mar/genética , Animais , Composição de Bases , Sequência de Bases , DNA/efeitos dos fármacos , DNA Ribossômico/efeitos dos fármacos , DNA Ribossômico/metabolismo , Ácido Edético/análogos & derivados , Ácido Edético/farmacologia , Histonas/genética , Temperatura Alta , Hidrólise , Quelantes de Ferro/farmacologia , Substâncias Macromoleculares , Dados de Sequência Molecular , Mutagênese Sítio-Dirigida , Nucleossomos/ultraestrutura , Proteínas Recombinantes de Fusão/metabolismo
12.
Mutat Res ; 348(4): 187-92, 1995 Dec.
Artigo em Inglês | MEDLINE | ID: mdl-8544872

RESUMO

The rate of ribosomal gene activity was evaluated by silver staining of the Nucleolus Organisers (NOs) in cultured CHO-K1 cells after a 12 h pulse with two demethylating agents (L-ethionine and 5-azacytidine). Silver staining of the NOs was measured every 24 h, from 24 up to 110 h after seeding. The purpose was to test the hypothesis that drug-induced demethylation is associated to heritable modifications of rDNA activity. Ribosomal gene activity was shown to be significantly increased by both agents. The increase persisted throughout the experiments, thereby suggesting the heritability of this epigenetic modification. The analysis of heritable DNA damage or modification is an important task in studying the risk of cancer onset and the mechanisms of cancer induction. In these studies two main results were obtained: (i) heritable DNA variations can be induced by both mutational and epigenetic changes; (ii) the modified end-point was not negatively selected.


Assuntos
Antimetabólitos/toxicidade , DNA Ribossômico/efeitos dos fármacos , Regulação Neoplásica da Expressão Gênica , Mutação em Linhagem Germinativa , Mutagênicos/toxicidade , Animais , Azacitidina/metabolismo , Azacitidina/toxicidade , Células CHO , Deleção Cromossômica , Células Clonais , Cricetinae , DNA Ribossômico/metabolismo , Etionina/metabolismo , Etionina/toxicidade , Metilação/efeitos dos fármacos , Índice Mitótico/efeitos dos fármacos , Mutagênicos/metabolismo , Região Organizadora do Nucléolo/efeitos dos fármacos , Região Organizadora do Nucléolo/metabolismo , Coloração pela Prata
13.
Bioorg Med Chem ; 3(6): 729-41, 1995 Jun.
Artigo em Inglês | MEDLINE | ID: mdl-7582951

RESUMO

Using the Xenopus borealis 5S RNA gene, we have identified several new features of the interaction of calicheamicin (CAL), an enediyne antitumor agent, with nucleosomal and naked DNA targets. CAL-mediated DNA damage was generally reduced by incorporation of the DNA into a nucleosome. However, in one instance, the frequency of DNA damage was enhanced in the nucleosome compared to naked DNA. This increase in CAL damage may result from bending-induced changes in the target site, while the association of histone proteins with DNA in the nucleosome may generally reduce the affinity of CAL for its targets by imposing dynamic constraints on the DNA, by altering target structure, or by steric hindrance. One implication of these observations is that new structural features created by incorporation of DNA into chromatin may produce 'hot spots' for CAL-mediated DNA damage not apparent in naked DNA studies. In a second set of experiments, the orientation of CAL at damage sites in naked 5S rDNA was determined. The results suggest that minor groove width per se is not a major determinant of CAL target selection. Our studies support the generality of an oligopurine recognition element, with the additional requirement that the purine tract is interrupted at the 3'-end by a pyrimidine(s). To account for these observations, we propose a model in which CAL recognizes the unique structural and dynamic features associated with the 3'-end of an oligopurine tract. Finally, we conclude that the dyad axis of pseudosymmetry of the 5S rRNA gene nucleosome cannot be determined with any degree of certainty. This places significant limitations on the interpretation of results from the study of drug-DNA interactions with reconstituted nucleosomes.


Assuntos
Aminoglicosídeos , Antibacterianos/farmacologia , Antibióticos Antineoplásicos/farmacologia , DNA/efeitos dos fármacos , Nucleossomos/genética , Animais , Antibacterianos/química , Antibióticos Antineoplásicos/química , Sequência de Bases , Sítios de Ligação , Galinhas , Dano ao DNA , DNA Ribossômico/efeitos dos fármacos , Enedi-Inos , Modelos Moleculares , Dados de Sequência Molecular , Nucleossomos/efeitos dos fármacos , RNA Ribossômico 5S/genética , Relação Estrutura-Atividade , Xenopus
14.
Gene Expr ; 4(3): 111-24, 1995.
Artigo em Inglês | MEDLINE | ID: mdl-7734947

RESUMO

We have previously characterized an RNA polymerase (pol) I transcription factor, E1BF, from rat cells. This protein is immunologically related to Ku autoantigen and is required in pol-I directed transcription of rodent ribosomal RNA gene (rDNA). Glycerol density gradient fractionation and in situ UV cross-linking analysis of the purified factor showed directly that it consists of a heterodimer of 85 and 72 kDa polypeptides. E1BF also interacted with the human core promoter and augmented transcription of human rDNA as much as fivefold in HeLa nuclear extract, whereas transcription from adenovirus major late promoter, CMV or SV40 early promoters by pol II and of U6 and 5S RNA genes by pol III were either unaffected or minimally inhibited by the antibodies. Purified rat E1BF partially restored the suppression of human rDNA transcription by anti-Ku antibodies. Immunoprecipitation of rat cell extract with the anti-Ku antibodies followed by SDS-PAGE of the precipitated proteins and Southwestern analysis showed that E1BF interacts with CPBF, a core promoter binding factor. When the majority of CPBF and E1BF was removed from the reaction mixture by preincubation with a core promoter oligo nucleotide fragment, rDNA transcription was severely impaired. Addition of exogenous CPBF or E1BF to such a reaction resulted in significant restoration of the transcription, whereas inclusion of both factors caused further enhancement of rDNA transcription. These data demonstrate that E1BF is a basal pol I transcription factor that interacts with a core promoter binding factor both physically and functionally, and that is not a general pol II or pol III transcription factor.


Assuntos
Antígenos Nucleares , DNA Helicases , Proteínas de Ligação a DNA/genética , Proteínas Nucleares/genética , RNA Ribossômico/genética , Fatores de Transcrição/genética , Transcrição Gênica , Adenoviridae/genética , Animais , DNA Ribossômico/efeitos dos fármacos , Proteínas de Ligação a DNA/química , Proteínas de Ligação a DNA/imunologia , Proteínas de Ligação a DNA/farmacologia , Humanos , Autoantígeno Ku , Proteínas Nucleares/química , Proteínas Nucleares/imunologia , Proteínas Nucleares/farmacologia , Regiões Promotoras Genéticas , Conformação Proteica , RNA Polimerase I/genética , RNA Polimerase II/genética , RNA Polimerase III/genética , RNA Ribossômico 5S/genética , Ratos , Especificidade da Espécie , Fatores de Transcrição/química , Fatores de Transcrição/farmacologia , Transcrição Gênica/efeitos dos fármacos , Transcrição Gênica/imunologia
15.
J Biol Chem ; 269(48): 30587-94, 1994 Dec 02.
Artigo em Inglês | MEDLINE | ID: mdl-7527033

RESUMO

The antitumor drugs bleomycin, neocarzinostatin, and melphalan all damage DNA by mechanisms which involve binding in the minor groove. In order to examine at high resolution the modulating effects of chromatin structure on the action of these drugs, an end-labeled DNA fragment from the Xenopus laevis 5 S rRNA gene was reconstituted with histone octamers to form a precisely positioned nucleosome. For each drug, DNA damage at specific sequence positions in the fragment was then compared for nucleosome-bound versus naked DNA. Reconstitution into nucleosomes resulted in a marked inhibition of the DNA cleavage induced by bleomycin (5-fold) and neocarzinostatin (2.4-fold) in the central region of nucleosomal DNA. However, at the periphery of nucleosome-bound DNA, a distinct asymmetry was apparent, with marked inhibition of cleavage toward the upstream side, but little if any inhibition toward the downstream side, which overlaps the binding site of the transcription factor TFIIIA. In the case of melphalan, alkylation at adenine N-3 was inhibited by nearly 2-fold throughout the nucleosome, whereas alkylation at guanine N-7 was either slightly inhibited or slightly enhanced, depending on sequence position. None of the drugs showed the 10-base pair periodicity characteristic of hydroxyl radical-induced cleavage of nucleosomal DNA. The results are consistent with a model in which minor groove sites in nucleosome-bound DNA remain relatively accessible to small molecules, even where the minor groove faces the histone core, and in which drug-induced DNA damage is inhibited by conformational constraints imposed on DNA by nucleosome structure. Furthermore, the degree of such constraints appears to be sequence-dependent, at least near the periphery of nucleosome-bound DNA.


Assuntos
Bleomicina/farmacologia , Dano ao DNA , DNA Ribossômico/efeitos dos fármacos , Melfalan/farmacologia , Nucleossomos/efeitos dos fármacos , Zinostatina/farmacologia , Animais , Sequência de Bases , Núcleo Celular/metabolismo , Galinhas , Cromatina/efeitos dos fármacos , Cromatina/metabolismo , Eritrócitos/metabolismo , Histonas/efeitos dos fármacos , Histonas/metabolismo , Dados de Sequência Molecular , Nucleossomos/metabolismo , Plasmídeos , RNA Ribossômico 5S/biossíntese , RNA Ribossômico 5S/genética , Mapeamento por Restrição , Transcrição Gênica , Xenopus laevis
16.
Photochem Photobiol ; 60(3): 225-30, 1994 Sep.
Artigo em Inglês | MEDLINE | ID: mdl-7972373

RESUMO

The nature of DNA interactions with photoactivated gilvocarcin V has been analyzed at the gene level in both rRNA and dihydrofolate reductase genes of human fibroblasts, utilizing a modified Southern hybridization technique. Neither interstrand DNA crosslinking nor RNA linkage to DNA was detected. However, we consistently observed in both genes retarded DNA bands appearing in a dose-dependent fashion following exposure to photoactivated gilvocarcin V. These retarded bands were enhanced when genomic DNA was prepared without proteinase K treatment, suggesting involvement of protein in this DNA interaction. Because these bands disappear following proteinase K treatment, it is probable that photoactivated gilvocarcin V induces DNA-protein crosslinking.


Assuntos
Aminoglicosídeos , Antibacterianos/farmacologia , Antibacterianos/efeitos da radiação , Proteínas de Ligação a DNA/efeitos dos fármacos , DNA/efeitos dos fármacos , Genes/efeitos dos fármacos , Substâncias Intercalantes/farmacologia , Fármacos Fotossensibilizantes/farmacologia , RNA Ribossômico/genética , Tetra-Hidrofolato Desidrogenase/genética , Southern Blotting , Linhagem Celular , Sobrevivência Celular/efeitos dos fármacos , Cumarínicos , DNA Ribossômico/efeitos dos fármacos , Anemia de Fanconi , Fibroblastos/efeitos dos fármacos , Fibroblastos/metabolismo , Glicosídeos , Humanos , Metoxaleno/farmacologia , Fotoquímica , Xeroderma Pigmentoso
17.
Biochemistry ; 33(34): 10286-93, 1994 Aug 30.
Artigo em Inglês | MEDLINE | ID: mdl-7520752

RESUMO

The effect of iron(II) bleomycin on a DNA-RNA heteroduplex was investigated using a substrate formed by reverse transcription of Escherichia coli 5S ribosomal RNA. Both strands of the heteroduplex were cleaved by FeII.BLM A2 at comparable concentrations; complete digestion of both strands was observed using 5 microM FeII.BLM A2. The DNA strand of the heteroduplex was cleaved predominantly at 5'-G-pyr-3' sites; the sites of cleavage of the DNA strand were a subset of those observed for the corresponding DNA strand of a DNA duplex of identical sequence. The sites of cleavage of the RNA strand of the heteroduplex involved both purines and pyrimidines and were found to be different than the sites of cleavage of the 5S rRNA alone, demonstrating that cleavage of the former must actually have involved heteroduplex recognition by FeII.BLM A2. Both the DNA and RNA strands of the heteroduplex were cleaved by FeII.BLM A2 in the presence of physiological concentrations of Mg2+, consistent with the possibility that DNA-RNA heteroduplexes may be therapeutically relevant targets for bleomycin.


Assuntos
Bleomicina/farmacologia , DNA Bacteriano/efeitos dos fármacos , Ácidos Nucleicos Heteroduplexes/efeitos dos fármacos , RNA Bacteriano/efeitos dos fármacos , Sequência de Bases , Sítios de Ligação , Bleomicina/química , DNA Bacteriano/química , DNA Bacteriano/genética , DNA Ribossômico/química , DNA Ribossômico/efeitos dos fármacos , DNA Ribossômico/genética , Escherichia coli/genética , Dados de Sequência Molecular , Estrutura Molecular , Ácidos Nucleicos Heteroduplexes/química , Ácidos Nucleicos Heteroduplexes/genética , RNA Bacteriano/química , RNA Bacteriano/genética , RNA Ribossômico 5S/química , RNA Ribossômico 5S/efeitos dos fármacos , RNA Ribossômico 5S/genética
18.
Cancer Res ; 54(3): 632-6, 1994 Feb 01.
Artigo em Inglês | MEDLINE | ID: mdl-8306322

RESUMO

To elucidate the molecular mechanism by which the potent anticancer drug, 5-fluorouracil (5-FUra), inhibits cell proliferation, the effect of its metabolite, 5-fluorouridine triphosphate, on transcription of rat rRNA gene and processing of pre-rRNA was investigated in S-100 extract from the mouse lymphosarcoma cells. The in vitro processing of pre-rRNA substrate synthesized from the T3 promoter occurred at the correct primary processing site. Replacement of UMP with 5-fluorouridine monophosphate in the rRNA substrate did not affect the pre-rRNA processing. Similar result was obtained when coupled transcription-processing was studied. When the coupled reaction was examined using extracts from the cells treated with 5-FUra, rRNA processing was abolished whereas transcription of rRNA gene was unaffected. Treatment of cells with thymidine along with 5-FUra did not reverse the inhibitory effect of the drug on rRNA processing. In contrast to the effect on rRNA processing, treatment of cells with 5-FUra did not impede the 3' end processing of pre-mRNA. These data show that inhibition of pre-rRNA processing is a major mechanism of action of 5-FUra and suggest that the activity and/or synthesis of a trans-acting factor(s) involved in this reaction is altered by the anticancer drug.


Assuntos
Fluoruracila/farmacologia , Linfoma não Hodgkin/tratamento farmacológico , Linfoma não Hodgkin/genética , Precursores de RNA/efeitos dos fármacos , Precursores de RNA/genética , RNA Ribossômico/efeitos dos fármacos , RNA Ribossômico/genética , Animais , Sequência de Bases , Divisão Celular/efeitos dos fármacos , Divisão Celular/fisiologia , Núcleo Celular/química , Núcleo Celular/efeitos dos fármacos , Núcleo Celular/fisiologia , DNA Ribossômico/efeitos dos fármacos , DNA Ribossômico/genética , Fluoruracila/metabolismo , Linfoma não Hodgkin/metabolismo , Camundongos , Dados de Sequência Molecular , Precursores de RNA/fisiologia , RNA Neoplásico/metabolismo , RNA Ribossômico/fisiologia , Transativadores/biossíntese , Transcrição Gênica/efeitos dos fármacos , Células Tumorais Cultivadas/efeitos dos fármacos , Nucleotídeos de Uracila/metabolismo , Nucleotídeos de Uracila/farmacologia , Uridina Trifosfato/análogos & derivados , Uridina Trifosfato/farmacologia
19.
Carcinogenesis ; 14(5): 919-24, 1993 May.
Artigo em Inglês | MEDLINE | ID: mdl-8504485

RESUMO

Cisplatin is a chemotherapeutic agent known to cause DNA damage. The cytotoxicity of this drug is believed to result from the formation of DNA intrastrand adducts (IA) and DNA interstrand crosslinks (ICL). While there are many studies on DNA repair of cisplatin damage at the overall level of the genome in various human cell lines, there is little information on the gene-specific repair. In this report, we have measured the formation and repair of cisplatin induced DNA adducts in the dihydrofolate reductase (DHFR) and ribosomal RNA (rRNA) genes in three cell lines: normal human fibroblasts, Fanconi's anemia complementation group A (FAA) and Xeroderma pigmentosum complementation group A (XPA). It is generally thought that XPA cells lack nucleotide excision repair and that FAA cells are deficient in the repair of DNA ICL. We find that normal human fibroblast cells repair 84% of the ICL in the DHFR gene after 24 h, whereas XPA and FAA cell lines only repaired 32 and 50% of the ICL respectively. Furthermore, 69% of the cisplatin IA in the DHFR gene were repaired in 24 h in normal human fibroblasts compared to 22% for XPA and 24% for FAA cells. The repair of the rRNA gene was less efficient than in the DHFR gene, but the relative pattern between the different cell lines was similar to that of the DHFR gene. We thus find that FAA cells are deficient not only in the gene specific repair of cisplatin ICL, but also in the gene specific repair of the more common cisplatin IA. XPA cells are normally thought to be without any nucleotide excision repair capacity, but our data could support a slight ICL unhooking activity.


Assuntos
Cisplatino/toxicidade , Dano ao DNA , Reparo do DNA , DNA/efeitos dos fármacos , Anemia de Fanconi/genética , Xeroderma Pigmentoso/genética , Linhagem Celular , Mapeamento Cromossômico , DNA/genética , DNA Ribossômico/efeitos dos fármacos , DNA Ribossômico/genética , Fibroblastos/efeitos dos fármacos , Fibroblastos/metabolismo , Teste de Complementação Genética , Humanos , Cinética , Tetra-Hidrofolato Desidrogenase/genética , Fatores de Tempo
20.
Biol Cell ; 74(3): 281-6, 1992.
Artigo em Inglês | MEDLINE | ID: mdl-1320976

RESUMO

The effects of camptothecin treatment and topoisomerase I inhibition on ribosomal gene structure and function were investigated in TG cells, a human tumour cell line. 90- and 180-min treatments with 25 microM camptothecin resulted in an increased DNA fragmentation and decreased activity of topoisomerase I in cell extracts. After 180-min treatment, the incorporation of labelled uridine into total cell RNA was reduced to 39% and the ribosomal RNA synthesis to 10%, as compared to values of control cells. At the ultrastructural level, the nucleolar components appeared to be segregated; after selective DNA staining, with osmium-amine complex, a part of the nucleolar chromatin of treated cells showed the presence of thin, extended DNA filaments, superimposable to those present in control cells.


Assuntos
Camptotecina/farmacologia , Nucléolo Celular/efeitos dos fármacos , DNA de Neoplasias/efeitos dos fármacos , DNA Ribossômico/efeitos dos fármacos , RNA Neoplásico/genética , RNA Ribossômico/genética , Inibidores da Topoisomerase I , Nucléolo Celular/ultraestrutura , Cromatina/efeitos dos fármacos , Cromatina/ultraestrutura , Dano ao DNA , Depressão Química , Genes/efeitos dos fármacos , Humanos , RNA Neoplásico/biossíntese , RNA Ribossômico/biossíntese , Transcrição Gênica/efeitos dos fármacos , Células Tumorais Cultivadas/efeitos dos fármacos , Células Tumorais Cultivadas/metabolismo , Células Tumorais Cultivadas/ultraestrutura
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